Cryo-EM Single Particle Analysis
cryo_em
Scientific Instrumentation
Electron
Forward-Model Signal Chain
Each primitive represents a physical operation in the measurement process. Arrows show signal flow left to right.
Spec Notation
C → D
Benchmark Variants & Leaderboards
Cryo-EM Single Particle Analysis
Cryo-EM Single Particle Analysis
Spec Notation
C → D
Standard Leaderboard (Top 10)
| # | Method | Score | PSNR (dB) | SSIM | Trust | Source |
|---|---|---|---|---|---|---|
| 🥇 | DiffusionCryo | 0.895 | 39.8 | 0.963 | ✓ Certified | Luo 2024 |
| 🥈 | CryoSTAR | 0.866 | 38.4 | 0.952 | ✓ Certified | Yang 2024 |
| 🥉 | CryoFormer | 0.839 | 37.1 | 0.941 | ✓ Certified | Gao 2024 |
| 4 | CryoGEM | 0.799 | 35.2 | 0.924 | ✓ Certified | He 2023 |
| 5 | cryoDRGN | 0.762 | 33.7 | 0.901 | ✓ Certified | Zhong 2021 |
| 6 | IsoNet | 0.709 | 31.4 | 0.871 | ✓ Certified | Liu 2021 |
| 7 | cryoSPARC | 0.630 | 28.1 | 0.823 | ✓ Certified | Punjani 2017 |
| 8 | RELION-3D | 0.571 | 25.8 | 0.782 | ✓ Certified | Scheres 2012 |
| 9 | CTFFIND4 | 0.479 | 22.3 | 0.714 | ✓ Certified | Rohou 2015 |
Mismatch Parameters (4) click to expand
| Name | Symbol | Description | Nominal | Perturbed |
|---|---|---|---|---|
| defocus_error | d_e | Defocus error (nm) | 0.0 | 100.0 |
| astigmatism | a | Astigmatism (nm) | 0.0 | 20.0 |
| beam_tilt | b_t | Beam tilt (mrad) | 0.0 | 0.2 |
| ice_thickness_variation | i_t | Ice thickness variation (nm) | 50.0 | 56.0 |