Public

Confocal Live-Cell — Public Tier

(5 scenes)

Full-access development tier with all data visible.

What you get

Measurements (y), ideal forward operator (H), spec ranges, ground truth (x_true), and true mismatch spec.

How to use

Load HDF5 → compare reconstruction vs x_true → check consistency → iterate.

What to submit

Reconstructed signals (x_hat) and corrected spec as HDF5.

Parameter Specifications

True spec visible — use these exact values for Scenario III oracle reconstruction.

Parameter Spec Range True Value Unit
pinhole -5.0 – 10.0 2.5 μm
refractive_index 1.51 – 1.525 1.5175
photobleaching -5.0 – 10.0 2.5 %

InverseNet Baseline Scores

Method: CPU_baseline — Mismatch parameter: nominal

Scenario I (Ideal)

13.27 dB

SSIM 0.3991

Scenario II (Mismatch)

11.88 dB

SSIM 0.2385

Scenario III (Oracle)

19.75 dB

SSIM 0.4579

Per-scene breakdown (4 scenes)
Scene PSNR I SSIM I PSNR II SSIM II PSNR III SSIM III
scene_00 17.02 0.3838 14.94 0.2440 20.04 0.5013
scene_01 14.23 0.2969 12.92 0.2098 19.23 0.5480
scene_02 8.52 0.3871 8.01 0.2308 20.11 0.3417
scene_03 13.30 0.5284 11.66 0.2694 19.61 0.4408

Public Tier Leaderboard

# Method Score PSNR SSIM Consistency Trust Source
1 DiffusionCell + gradient 0.857 37.54 0.98 0.95 ✓ Certified Gao et al., Nat. Methods 2024
2 Restormer-Micro + gradient 0.841 36.47 0.976 0.93 ✓ Certified Zamir et al., CVPR 2022 (microscopy)
3 SwinIR-LiveCell + gradient 0.824 35.19 0.969 0.92 ✓ Certified Liang et al., ICCV 2021 (live-cell)
4 PN2V + gradient 0.775 31.29 0.935 0.94 ✓ Certified Krull et al., ECCV 2020
5 CARE + gradient 0.759 30.62 0.926 0.91 ✓ Certified Weigert et al., Nat. Methods 2018
6 Noise2Void + gradient 0.738 29.81 0.914 0.87 ✓ Certified Krull et al., CVPR 2019
7 Noise2Self + gradient 0.707 27.61 0.872 0.91 ✓ Certified Batson & Royer, ICML 2019
8 NLM-Fluorescence + gradient 0.640 24.8 0.796 0.87 ✓ Certified Buades et al., CVPR 2005
9 VST-Denoise + gradient 0.603 22.71 0.72 0.94 ✓ Certified Anscombe, Biometrika 1948

Visible Data Fields

y H_ideal spec_ranges x_true true_spec

Dataset

Format: HDF5
Scenes: 5

Scoring Formula

0.4 × PSNR_norm + 0.4 × SSIM + 0.2 × (1 − ‖y − Ĥx̂‖/‖y‖)

PSNR: 40% SSIM: 40% Consistency: 20%
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